prefix.bam file contains clipped records, annotated with barcode tags, that passed filters.
Each barcode pair is represented by one read group @RG header line, with the
DS tag containing optionally those items
|Key||Value spec||Value example|
|BarcodeFile||Name of the Fasta file containing the sequences of the barcodes used.||pacbio_384_barcodes.fasta|
|BarcodeHash||The MD5 hash of the contents of the barcoding sequence file, as generated by the md5sum commandline tool.||0a294bb959fc6c766967fc8beeb4d88d|
|BarcodeCount||The number of barcode sequences in the Barcode File.||384|
|BarcodeMode||Experimental design of the barcodes. Must be Symmetric/Asymmetric/Tailed or None.||Symmetric|
|BarcodeQuality||The type of value encoded by the bq tag. Must be Score/Probability/None.||Probability|
| || ||Barcode pair indices, integer codes represent 0-based position in the FASTA file of barcodes|
| || ||Barcode score / quality, normalized between 0 and 100|
| || ||Barcode sequence clipped from leading end|
| || ||Barcode sequence clipped from trailing end|
| || ||Qualities of barcode bases clipped from leading end, stored as a FASTQ string|
| || ||Qualities of barcode bases clipped from trailing end, stored as a FASTQ string|
| || ||Pair of clipped barcode sequence lengths|
One DataSet, SubreadSet or ConsensusReadset, is generated per output BAM file.
One PBI file is generated per output BAM file.