How fast is fast?
Example: 64 barcodes / asymmetric mode / 1.9M HiFi reads on a dual 64c EPYC system:
Processed : 1912155
Run Time : 48s 306ms
CPU Time : 2h 14m
That’s 2.4M HiFi reads processed per minute on 128 physical CPU cores, including IO.
Is there a way to show the progress?
Yes, please use
--log-level INFO. If there is a
.pbi file present, the estimated time will be shown. Otherwise, it will show progress as number of reads every 5 seconds.